feat(config): update .gitignore to exclude output artifacts and add config files

- ignore all output files except for reports and config directories
- add new .done files for tasks 01-11 to track completion status
- include new configuration files for hardware prices and lab setup
- generate process flow and report documents for tasks 02 and 11

out/report/diagrams/D6.mermaid

@@ -0,0 +1,13 @@
+erDiagram
+    DEPOSITION_RUN ||--|| SIMTRA_PROFILE : produces
+    DEPOSITION_RUN ||--|| BATCH : creates
+    BATCH ||--|{ WAFER : contains
+    WAFER ||--|{ COUPON : contains
+    COUPON ||--|| XRF_MAP : has
+    COUPON ||--|| NANOINDENTATION : has
+    COUPON ||--|| AFM : has
+    COUPON ||--|| PROFILOMETRY : has
+    COUPON ||--o{ TRACK : "friction coupons only"
+    TRACK ||--|{ CYCLE : has
+    TRACK ||--|{ LOOP_POINT : has
+    TRACK ||--|| WEAR : has