feat(config): update .gitignore to exclude output artifacts and add config files

- ignore all output files except for reports and config directories
- add new .done files for tasks 01-11 to track completion status
- include new configuration files for hardware prices and lab setup
- generate process flow and report documents for tasks 02 and 11

out/report/diagrams/D1.mermaid

@@ -0,0 +1,9 @@
+flowchart LR
+    A([Ti-6Al-4V Base 10x10x3 mm]) --> B[Cleaning]
+    B --> B1([Rinsed in deionized water])
+    B1 --> B2([Sonicated in cleaning solution])
+    B --> C[Smearing Adhesive]
+    C --> C1([Cr adhesive coating])
+    C --> D[Vapor Deposition System<br/>Kurt J. Lesker PVD 200]
+    D --> D1([PtAu sputter coating, gradient])
+    D --> E([Test Coupon])

out/report/diagrams/D2.mermaid

@@ -0,0 +1,9 @@
+flowchart LR
+    TC([Test Coupon]) --> S[SIMTRA simulation<br/>composition / atom energies]
+    S --> OP[Optical profilometry<br/>film thickness 0.3-1.1 um]
+    OP --> TW[Assemble Test Wafer<br/>x49 coupons]
+    TW --> TB[Assemble Test Batch<br/>x3 wafers]
+    TB --> B721[B721<br/>Pt 150 W / Au 50 W]
+    TB --> B722[B722<br/>Pt 100 W / Au 100 W]
+    TB --> B723[B723<br/>Pt 150 W / Au 50 W]
+    TB --> B724[B724<br/>Pt 50 W / Au 150 W]

out/report/diagrams/D3.mermaid

@@ -0,0 +1,10 @@
+flowchart TD
+    TC([Test Coupon]) --> F[Friction<br/>RAPID 6-probe tribometer]
+    F --> FA([Lab Air -> COF dataset mu_normal])
+    F --> FN([Dry N2 -> COF dataset mu_dry_nit])
+    TC --> NI[Nanoindentation<br/>Bruker TI980]
+    NI --> NIR([Hardness, reduced modulus<br/>25 indents per coupon])
+    TC --> AF[AFM]
+    AF --> AFR([Topography -> Ra / Rq])
+    TC --> XR[micro-XRF<br/>Bruker M4 Tornado]
+    XR --> XRR([Pt/Au wt% map, 20x20 grid])

out/report/diagrams/D4.mermaid

@@ -0,0 +1,23 @@
+sequenceDiagram
+    actor Op as Operator
+    participant Prep as Sample Prep
+    participant Plan as Excel Test Plan
+    participant SW as Control Software
+    participant TR as RAPID Tribometer
+
+    Op->>Prep: Request test
+    Op->>Prep: Get samples
+    Op->>Prep: Load samples onto plates
+    Op->>Prep: Load ball holders (3 counterfaces per holder)
+    Op->>Plan: Create test plan<br/>(Sample Plate, Plate Location, Sample ID, Save Location,<br/>Folder Name, X/Y/Z Offset, Load, Iterations)
+    Op->>TR: Transfer plates to tribometer
+    Op->>TR: Set up platter
+    Op->>SW: Activate software
+    Op->>SW: Load plan
+    SW->>TR: Activate tribometer
+    TR-->>SW: Run reciprocating tests (execution loop, see D5)
+    Op->>SW: Software stop
+    SW-->>Op: Save avg files
+    Op->>TR: Remove plates and platters
+    Op->>SW: Close software
+    Op->>TR: Pull equipment out

out/report/diagrams/D5.mermaid

@@ -0,0 +1,8 @@
+flowchart TD
+    L[Load all counterfaces] --> P{5 plates}
+    P -->|for each plate| PR{6 probes in parallel}
+    PR -->|for each probe| C{4 coupons on coupon square}
+    C -->|for each coupon| T[Draw track]
+    T --> RC[Rotate counterface - fresh ball per track]
+    RC -->|3 tracks per coupon| T
+    T --> DONE([120 coupons x 3 tracks = 360 tracks per run])

out/report/diagrams/D6.mermaid

@@ -0,0 +1,13 @@
+erDiagram
+    DEPOSITION_RUN ||--|| SIMTRA_PROFILE : produces
+    DEPOSITION_RUN ||--|| BATCH : creates
+    BATCH ||--|{ WAFER : contains
+    WAFER ||--|{ COUPON : contains
+    COUPON ||--|| XRF_MAP : has
+    COUPON ||--|| NANOINDENTATION : has
+    COUPON ||--|| AFM : has
+    COUPON ||--|| PROFILOMETRY : has
+    COUPON ||--o{ TRACK : "friction coupons only"
+    TRACK ||--|{ CYCLE : has
+    TRACK ||--|{ LOOP_POINT : has
+    TRACK ||--|| WEAR : has